This is the second diagnostic plot (estimated conversions) generated by GRAND3.
Arguments
- data
the grandR object
- category
show a specific category (see GetDiagnosticParameters); cannot be NULL
- sample
compare subreads for a specific sample; can be NULL, then compare all samples per subread
- max.columns
if there are more columns (samples for bulk, cells for single cell) than this, show boxplots instead of points
Details
Show the percentage of all conversion types for all samples. In contrast to mismatches (see PlotMismatchPositionForSample and PlotMismatchPositionForType), the correct strand is already inferred for conversions, i.e. conversions refer to actual conversion events on RNA, whereas mismatches are observed events in mapped reads.