Function to compute the abundance of new or old RNA at time t for non-constant rates.
Source:R/modeling.R
f.nonconst.linear.Rd
The standard mass action kinetics model of gene expression arises from the differential equation \(df/dt = s(t) - d(t) f(t)\), with s(t) being the synthesis rate at time t, d(t) the degradation rate at time t and \(f0=f(0)\) (the abundance at time 0). Here, both s and d have the following form \(s(t)=so+sf \cdot t^{se}\).
Arguments
- t
time in h (can be a vector)
- f0
the abundance at time t=0
- so
synthesis date offset
- sf
synthesis date factor
- se
synthesis date exponent
- do
degradation rate offset
- df
degradation rate factor
- de
degradation rate exponent