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Create Convolution Table from a Seurat object

Source: R/seurat.R
CreateConvolutionTable.Rd

Create Convolution Table from a Seurat object

Usage

CreateConvolutionTable(data, n.neighbors = 20)

Arguments

data

a Seurat object

n.neighbors

the number of neighbors to be convoluted

Value

a table with two columns "Cell" and "Pseudobulk"

Details

This function returns a table which can be used as input for GRAND3. Note that a data set contatining multiple time points should be split before convolution.