The default slot is used by default by many functions including
GetData
,GetTable
or FitKinetics
Value
Either the name of the default slot for DefaultSlot(data) or the grandR data object having the new default slot
Details
The default slot can be set either by data<-DefaultSlot(data,"norm")
or by DefaultSlot(data)<-"norm"
.
Examples
sars <- ReadGRAND(system.file("extdata", "sars.tsv.gz", package = "grandR"),
design=c("Cell",Design$dur.4sU,Design$Replicate))
#> Warning: Duplicate gene symbols (n=1, e.g. MATR3) present, making unique!
DefaultSlot(sars)
#> [1] "count"
sars <- Normalize(sars) # default behavior is to update the default slot
DefaultSlot(sars)
#> [1] "norm"
DefaultSlot(sars)="count"